Arabidopsis lyrata is a perennial, outbreeding, rosette-forming herb found between sea level and <1500 m in elevation in cold-temperate to mild climatic regions of the Northern Hemisphere. A high-quality genome sequence for the partially inbred A. lyrata strain MN47 was assembled from approximately 8.3x coverage of paired-end dideoxy sequencing reads using libraries with different insert sizes, making use of information from genetic maps and chromosome painting, by lab of Detlef Weigel and Joint genome Institute (JGI). DNA sequences have been deposited in GenBank under accession number ADBK00000000. Seeds of the MN47 strain have been deposited with the Arabidopsis Biological Resource Center under accession number CS22696. JGI's website: http://genome.jgi-psf.org/Araly1/Araly1.info.html
Promoter sequences (1000 bp upstream of ATG (start codon) extracted from Arabidopsis lyrata annoation (A. lyrata v1.0, April 7, 2008).
Click on table row to download sequence. An archive of all sequences is available here.
| Protein ID | Gene ID | Transcript ID |
|---|---|---|
This dataset was extracted by Ya-Long Guo and Joffrey Fitz from the A. lyrata genome.